3D structure

PDB id
3J6B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AA*UAAAAUC*GUU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J6B|1|A|A|961
3J6B|1|A|A|962
*
3J6B|1|A|U|1062
3J6B|1|A|A|1063
3J6B|1|A|A|1064
3J6B|1|A|A|1065
3J6B|1|A|A|1066
3J6B|1|A|U|1067
3J6B|1|A|C|1068
*
3J6B|1|A|G|1085
3J6B|1|A|U|1086
3J6B|1|A|U|1087

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain 0
54S ribosomal protein RTC6, mitochondrial
Chain F
54S ribosomal protein L6, mitochondrial
Chain K
54S ribosomal protein L16, mitochondrial
Chain c
54S ribosomal protein L31, mitochondrial

Coloring options:

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