J3_3J6B_008

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCAAAGAUAG*CAAAG*CAAC

Length

19 nucleotides

Bulged bases

3J6B|1|A|U|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|G|1626
3J6B|1|A|C|1627
3J6B|1|A|A|1628
3J6B|1|A|A|1629
3J6B|1|A|A|1630
3J6B|1|A|G|1631
3J6B|1|A|A|1632
3J6B|1|A|U|1633
3J6B|1|A|A|1634
3J6B|1|A|G|1635
*
3J6B|1|A|C|1668
3J6B|1|A|A|1669
3J6B|1|A|A|1670
3J6B|1|A|A|1671
3J6B|1|A|G|1672
*
3J6B|1|A|C|1887
3J6B|1|A|A|1888
3J6B|1|A|A|1889
3J6B|1|A|C|1890

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial

Chain I

54S ribosomal protein L38, mitochondrial

Chain T

54S ribosomal protein L4, mitochondrial