J3_3J6B_010

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCG*CUAAU*AGACAA

Length

14 nucleotides

Bulged bases

3J6B|1|A|A|2093

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|U|1993
3J6B|1|A|C|1994
3J6B|1|A|G|1995
*
3J6B|1|A|C|2091
3J6B|1|A|U|2092
3J6B|1|A|A|2093
3J6B|1|A|A|2094
3J6B|1|A|U|2095
*
3J6B|1|A|A|2249
3J6B|1|A|G|2250
3J6B|1|A|A|2251
3J6B|1|A|C|2252
3J6B|1|A|A|2253
3J6B|1|A|A|2254

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial

Chain G

54S ribosomal protein L50, mitochondrial

Chain S

54S ribosomal protein L24, mitochondrial