J3_3J6B_011
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUC*GUU*AUUAAAA
- Length
- 14 nucleotides
- Bulged bases
- 3J6B|1|A|U|2784, 3J6B|1|A|U|2785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J6B_011 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.1433
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
3J6B|1|A|U|2783
3J6B|1|A|U|2784
3J6B|1|A|U|2785
3J6B|1|A|C|2786
*
3J6B|1|A|G|2812
3J6B|1|A|U|2813
3J6B|1|A|U|2814
*
3J6B|1|A|A|2828
3J6B|1|A|U|2829
3J6B|1|A|U|2830
3J6B|1|A|A|2831
3J6B|1|A|A|2832
3J6B|1|A|A|2833
3J6B|1|A|A|2834
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain I
- 54S ribosomal protein L38, mitochondrial
Coloring options: