J3_3J6B_012

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UA*UAAUAAUUAU*AAUUUA

Length

18 nucleotides

Bulged bases

3J6B|1|A|U|3154, 3J6B|1|A|A|3155, 3J6B|1|A|U|3254

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|U|3130
3J6B|1|A|A|3131
*
3J6B|1|A|U|3147
3J6B|1|A|A|3148
3J6B|1|A|A|3149
3J6B|1|A|U|3150
3J6B|1|A|A|3151
3J6B|1|A|A|3152
3J6B|1|A|U|3153
3J6B|1|A|U|3154
3J6B|1|A|A|3155
3J6B|1|A|U|3156
*
3J6B|1|A|A|3250
3J6B|1|A|A|3251
3J6B|1|A|U|3252
3J6B|1|A|U|3253
3J6B|1|A|U|3254
3J6B|1|A|A|3255

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial

Chain L

54S ribosomal protein L8, mitochondrial

Chain M

54S ribosomal protein IMG1, mitochondrial

Chain O

54S ribosomal protein L22, mitochondrial

Chain W

54S ribosomal protein L32, mitochondrial