3D structure

PDB id
3J6B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UAUAA*UCUAUAUUA*UUUAAUUA
Length
22 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J6B|1|A|U|2972
3J6B|1|A|A|2973
3J6B|1|A|U|2974
3J6B|1|A|A|2975
3J6B|1|A|A|2976
*
3J6B|1|A|U|3013
3J6B|1|A|C|3014
3J6B|1|A|U|3015
3J6B|1|A|A|3016
3J6B|1|A|U|3017
3J6B|1|A|A|3018
3J6B|1|A|U|3019
3J6B|1|A|U|3020
3J6B|1|A|A|3021
*
3J6B|1|A|U|3030
3J6B|1|A|U|3031
3J6B|1|A|U|3032
3J6B|1|A|A|3033
3J6B|1|A|A|3034
3J6B|1|A|U|3035
3J6B|1|A|U|3036
3J6B|1|A|A|3037

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain L
54S ribosomal protein L8, mitochondrial
Chain T
54S ribosomal protein L4, mitochondrial
Chain d
Mitochondrial homologous recombination protein 1

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.176 s