J3_3J71_014
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCUGGGCAG*CGUAG*UCCGACCUGGG
- Length
- 25 nucleotides
- Bulged bases
- 3J71|1|5|A|1613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|C|1540
3J71|1|5|C|1541
3J71|1|5|U|1542
3J71|1|5|G|1543
3J71|1|5|G|1544
3J71|1|5|G|1545
3J71|1|5|C|1546
3J71|1|5|A|1547
3J71|1|5|G|1548
*
3J71|1|5|C|1580
3J71|1|5|G|1581
3J71|1|5|U|1582
3J71|1|5|A|1583
3J71|1|5|G|1584
*
3J71|1|5|U|1609
3J71|1|5|C|1610
3J71|1|5|C|1611
3J71|1|5|G|1612
3J71|1|5|A|1613
3J71|1|5|C|1614
3J71|1|5|C|1615
3J71|1|5|U|1616
3J71|1|5|G|1617
3J71|1|5|G|1618
3J71|1|5|G|1619
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL12
- Chain R
- Ribosomal protein eL19
- Chain g
- Ribosomal protein eL34
- Chain j
- Ribosomal protein eL37
- Chain p
- Ribosomal protein eL43
Coloring options: