J3_3J71_017
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAGAUGG*CCAGU*AGGGUGUAAAUCUC
- Length
- 27 nucleotides
- Bulged bases
- 3J71|1|5|U|2554, 3J71|1|5|C|2768
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|G|2549
3J71|1|5|G|2550
3J71|1|5|A|2551
3J71|1|5|G|2552
3J71|1|5|A|2553
3J71|1|5|U|2554
3J71|1|5|G|2555
3J71|1|5|G|2556
*
3J71|1|5|C|2571
3J71|1|5|C|2572
3J71|1|5|A|2573
3J71|1|5|G|2574
3J71|1|5|U|2575
*
3J71|1|5|A|2757
3J71|1|5|G|2758
3J71|1|5|G|2759
3J71|1|5|G|2760
3J71|1|5|U|2761
3J71|1|5|G|2762
3J71|1|5|U|2763
3J71|1|5|A|2764
3J71|1|5|A|2765
3J71|1|5|A|2766
3J71|1|5|U|2767
3J71|1|5|C|2768
3J71|1|5|U|2769
3J71|1|5|C|2770
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain Z
- Ribosomal protein eL27
- Chain g
- Ribosomal protein eL34
Coloring options: