J3_3J71_020
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCGGUUG*CCUUCGUCCU*GUCACGCACGCCGUUCGUGG
- Length
- 37 nucleotides
- Bulged bases
- 3J71|1|5|C|4883, 3J71|1|5|C|4937, 3J71|1|5|C|4939, 3J71|1|5|C|4944, 3J71|1|5|G|4945, 3J71|1|5|G|4951
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|U|4748
3J71|1|5|C|4749
3J71|1|5|G|4750
3J71|1|5|G|4751
3J71|1|5|U|4752
3J71|1|5|U|4753
3J71|1|5|G|4754
*
3J71|1|5|C|4879
3J71|1|5|C|4880
3J71|1|5|U|4881
3J71|1|5|U|4882
3J71|1|5|C|4883
3J71|1|5|G|4884
3J71|1|5|U|4885
3J71|1|5|C|4886
3J71|1|5|C|4887
3J71|1|5|U|4888
*
3J71|1|5|G|4931
3J71|1|5|U|4932
3J71|1|5|C|4933
3J71|1|5|A|4934
3J71|1|5|C|4935
3J71|1|5|G|4936
3J71|1|5|C|4937
3J71|1|5|A|4938
3J71|1|5|C|4939
3J71|1|5|G|4941
3J71|1|5|C|4942
3J71|1|5|C|4944
3J71|1|5|G|4945
3J71|1|5|U|4946
3J71|1|5|U|4947
3J71|1|5|C|4948
3J71|1|5|G|4949
3J71|1|5|U|4950
3J71|1|5|G|4951
3J71|1|5|G|4952
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein eL6
- Chain M
- Ribosomal protein eL14
- Chain O
- Ribosomal protein uL13
- Chain f
- Ribosomal protein eL33
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