J3_3J72_002
3D structure
- PDB id
- 3J72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGUGAACUA*UAGGG*UAAUCGAACC
- Length
- 24 nucleotides
- Bulged bases
- 3J72|1|5|A|1534, 3J72|1|5|A|1638, 3J72|1|5|G|1641
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J72|1|5|G|1529
3J72|1|5|G|1530
3J72|1|5|U|1531
3J72|1|5|G|1532
3J72|1|5|A|1533
3J72|1|5|A|1534
3J72|1|5|C|1535
3J72|1|5|U|1536
3J72|1|5|A|1537
*
3J72|1|5|U|1622
3J72|1|5|A|1623
3J72|1|5|G|1624
3J72|1|5|G|1625
3J72|1|5|G|1626
*
3J72|1|5|U|1636
3J72|1|5|A|1637
3J72|1|5|A|1638
3J72|1|5|U|1639
3J72|1|5|C|1640
3J72|1|5|G|1641
3J72|1|5|A|1642
3J72|1|5|A|1643
3J72|1|5|C|1644
3J72|1|5|C|1645
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL12
- Chain C
- Ribosomal protein uL4
- Chain N
- Ribosomal protein eL15
- Chain P
- Ribosomal protein uL22
- Chain j
- Ribosomal protein eL37
Coloring options: