J3_3J72_018
3D structure
- PDB id
- 3J72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCACGG*CUGACCCGGUGAGGC*GCUCCGGGGACAGUGC
- Length
- 37 nucleotides
- Bulged bases
- 3J72|1|5|G|4084, 3J72|1|5|G|4086, 3J72|1|5|G|4087, 3J72|1|5|C|4162, 3J72|1|5|U|4163
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J72|1|5|G|3934
3J72|1|5|C|3935
3J72|1|5|A|3936
3J72|1|5|C|3937
3J72|1|5|G|3938
3J72|1|5|G|3939
*
3J72|1|5|C|4074
3J72|1|5|U|4075
3J72|1|5|G|4076
3J72|1|5|A|4077
3J72|1|5|C|4078
3J72|1|5|C|4079
3J72|1|5|C|4080
3J72|1|5|G|4081
3J72|1|5|G|4082
3J72|1|5|U|4083
3J72|1|5|G|4084
3J72|1|5|A|4085
3J72|1|5|G|4086
3J72|1|5|G|4087
3J72|1|5|C|4088
*
3J72|1|5|G|4161
3J72|1|5|C|4162
3J72|1|5|U|4163
3J72|1|5|C|4164
3J72|1|5|C|4165
3J72|1|5|G|4166
3J72|1|5|G|4167
3J72|1|5|G|4168
3J72|1|5|G|4169
3J72|1|5|A|4170
3J72|1|5|C|4171
3J72|1|5|A|4172
3J72|1|5|G|4173
3J72|1|5|U|4174
3J72|1|5|G|4175
3J72|1|5|C|4176
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- Ribosomal protein uL12
- Chain G
- Ribosomal protein eL8
- Chain N
- Ribosomal protein eL15
- Chain X
- Ribosomal protein uL23
- Chain i
- Ribosomal protein eL36
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