J3_3J7R_036
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCAGGA*UCCCAGUAA*UGAUUAAG
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|S2|C|1218
3J7R|1|S2|C|1219
3J7R|1|S2|A|1220
3J7R|1|S2|G|1221
3J7R|1|S2|G|1222
3J7R|1|S2|A|1223
*
3J7R|1|S2|U|1643
3J7R|1|S2|C|1644
3J7R|1|S2|C|1645
3J7R|1|S2|C|1646
3J7R|1|S2|A|1647
3J7R|1|S2|G|1648
3J7R|1|S2|U|1649
3J7R|1|S2|A|1650
3J7R|1|S2|A|1651
*
3J7R|1|S2|U|1673
3J7R|1|S2|G|1674
3J7R|1|S2|A|1675
3J7R|1|S2|U|1676
3J7R|1|S2|U|1677
3J7R|1|S2|A|1678
3J7R|1|S2|A|1679
3J7R|1|S2|G|1680
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S6
- Transfer RNA; tRNA
- Chain SF
- Ribosomal protein uS7
- Chain SQ
- Ribosomal protein uS9
- Chain SR
- Ribosomal protein eS17
- Chain Sc
- Ribosomal protein eS28
Coloring options: