J3_3J7Z_001

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

3J7Z|1|A|U|686, 3J7Z|1|A|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J7Z_001 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0716

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

3J7Z|1|A|U|683
3J7Z|1|A|G|684
3J7Z|1|A|A|685
3J7Z|1|A|U|686
3J7Z|1|A|C|687
3J7Z|1|A|U|688
3J7Z|1|A|A|689
*
3J7Z|1|A|U|773
3J7Z|1|A|G|774
3J7Z|1|A|G|775
*
3J7Z|1|A|C|791
3J7Z|1|A|A|792
3J7Z|1|A|A|793
3J7Z|1|A|A|794

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2