J3_3J7Z_002

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J7Z_002 not in the Motif Atlas

Homologous match to J3_5J7L_039

Geometric discrepancy: 0.0496

The information below is about J3_5J7L_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.7

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

3J7Z|1|A|C|698
3J7Z|1|A|A|699
3J7Z|1|A|G|700
*
3J7Z|1|A|C|732
3J7Z|1|A|G|733
3J7Z|1|A|A|734
3J7Z|1|A|A|735
3J7Z|1|A|C|736
*
3J7Z|1|A|G|760
3J7Z|1|A|A|761
3J7Z|1|A|U|762
3J7Z|1|A|G|763

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2