J3_3J9Y_009
3D structure
- PDB id
- 3J9Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 3J9Y|1|A|U|2334, 3J9Y|1|A|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9Y|1|A|C|2295
3J9Y|1|A|U|2296
3J9Y|1|A|A|2297
3J9Y|1|A|A|2298
3J9Y|1|A|U|2299
*
3J9Y|1|A|A|2317
3J9Y|1|A|G|2318
3J9Y|1|A|G|2319
3J9Y|1|A|U|2320
3J9Y|1|A|U|2321
3J9Y|1|A|A|2322
3J9Y|1|A|G|2323
*
3J9Y|1|A|C|2332
3J9Y|1|A|A|2333
3J9Y|1|A|U|2334
3J9Y|1|A|A|2335
3J9Y|1|A|A|2336
3J9Y|1|A|G|2337
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
- Chain v
- Transfer RNA; tRNA
Coloring options: