J3_3JAG_003

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GCGCAGUC*GUGC*GACGUC

Length

18 nucleotides

Bulged bases

3JAG|1|5|G|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|G|448
3JAG|1|5|C|449
3JAG|1|5|G|450
3JAG|1|5|C|451
3JAG|1|5|A|452
3JAG|1|5|G|453
3JAG|1|5|U|454
3JAG|1|5|C|455
*
3JAG|1|5|G|701
3JAG|1|5|U|702
3JAG|1|5|G|703
3JAG|1|5|C|704
*
3JAG|1|5|G|1293
3JAG|1|5|A|1294
3JAG|1|5|C|1295
3JAG|1|5|G|1296
3JAG|1|5|U|1297
3JAG|1|5|C|1298

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

eL6

Chain e

eL32

Chain f

eL33