J3_3JAG_004
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
- Length
- 33 nucleotides
- Bulged bases
- 3JAG|1|5|A|960, 3JAG|1|5|C|962, 3JAG|1|5|G|965, 3JAG|1|5|G|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAG|1|5|A|711
3JAG|1|5|C|712
3JAG|1|5|C|713
*
3JAG|1|5|G|955
3JAG|1|5|A|956
3JAG|1|5|G|957
3JAG|1|5|G|958
3JAG|1|5|G|959
3JAG|1|5|A|960
3JAG|1|5|G|961
3JAG|1|5|C|962
3JAG|1|5|G|963
3JAG|1|5|A|964
3JAG|1|5|G|965
3JAG|1|5|A|966
3JAG|1|5|C|967
3JAG|1|5|C|968
3JAG|1|5|C|969
3JAG|1|5|G|970
3JAG|1|5|U|971
3JAG|1|5|C|972
3JAG|1|5|G|973
3JAG|1|5|C|974
3JAG|1|5|C|975
3JAG|1|5|G|976
*
3JAG|1|5|C|1278
3JAG|1|5|A|1279
3JAG|1|5|C|1280
3JAG|1|5|G|1281
3JAG|1|5|G|1282
3JAG|1|5|G|1283
3JAG|1|5|G|1284
3JAG|1|5|U|1285
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain E
- eL6
- Chain F
- uL30
- Chain e
- eL32
- Chain f
- eL33
- Chain r
- eL28
Coloring options: