J3_3JAG_007

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAGGAC*GCUAAGG*CACCUG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|C|1966
3JAG|1|5|A|1967
3JAG|1|5|G|1968
3JAG|1|5|G|1969
3JAG|1|5|A|1970
3JAG|1|5|C|1971
*
3JAG|1|5|G|1995
3JAG|1|5|C|1996
3JAG|1|5|U|1997
3JAG|1|5|A|1998
3JAG|1|5|A|1999
3JAG|1|5|G|2000
3JAG|1|5|G|2001
*
3JAG|1|5|C|2016
3JAG|1|5|A|2017
3JAG|1|5|C|2018
3JAG|1|5|C|2019
3JAG|1|5|U|2020
3JAG|1|5|G|2021

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain m

eL40

Chain s

uL10

Chain t

uL11