J3_3JAG_020

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UGGA*UUAAGA*UA

Length

12 nucleotides

Bulged bases

3JAG|1|9|G|921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|9|U|682
3JAG|1|9|G|683
3JAG|1|9|G|684
3JAG|1|9|A|685
*
3JAG|1|9|U|917
3JAG|1|9|U|918
3JAG|1|9|A|919
3JAG|1|9|A|920
3JAG|1|9|G|921
3JAG|1|9|A|922
*
3JAG|1|9|U|1022
3JAG|1|9|A|1023

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain HH

eS7

Chain LL

uS17

Chain NN

uS15

Chain WW

uS8

Chain XX

uS12

Chain bb

eS27