J3_3JAG_023

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CCG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

3JAG|1|9|C|1138, 3JAG|1|9|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|9|C|1094
3JAG|1|9|C|1095
3JAG|1|9|G|1096
*
3JAG|1|9|U|1136
3JAG|1|9|U|1137
3JAG|1|9|C|1138
3JAG|1|9|C|1139
3JAG|1|9|G|1140
*
3JAG|1|9|C|1147
3JAG|1|9|A|1148
3JAG|1|9|A|1149
3JAG|1|9|A|1150
3JAG|1|9|G|1151

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain AA

uS2

Chain NN

uS15

Chain VV

eS21

Chain WW

uS8

Chain aa

eS26

Chain bb

eS27