J3_3JAG_032

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

3JAG|1|5|C|216, 3JAG|1|5|C|217, 3JAG|1|5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|C|196
3JAG|1|5|A|197
3JAG|1|5|A|198
3JAG|1|5|G|199
*
3JAG|1|5|C|215
3JAG|1|5|C|216
3JAG|1|5|C|217
3JAG|1|5|A|218
3JAG|1|5|G|219
3JAG|1|5|C|220
3JAG|1|5|C|221
3JAG|1|5|C|222
3JAG|1|5|G|223
3JAG|1|5|U|224
3JAG|1|5|G|225
3JAG|1|5|G|226
3JAG|1|5|A|227
3JAG|1|5|C|228
*
3JAG|1|5|G|240
3JAG|1|5|G|241
3JAG|1|5|U|242
3JAG|1|5|A|243
3JAG|1|5|G|244

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain Y

uL24