J3_3JAG_037

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GGAGAUG*CAGU*AGGGUGUAAAUCUC

Length

25 nucleotides

Bulged bases

3JAG|1|5|C|2768

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|G|2549
3JAG|1|5|G|2550
3JAG|1|5|A|2551
3JAG|1|5|G|2552
3JAG|1|5|A|2553
3JAG|1|5|U|2554
3JAG|1|5|G|2555
*
3JAG|1|5|C|2572
3JAG|1|5|A|2573
3JAG|1|5|G|2574
3JAG|1|5|U|2575
*
3JAG|1|5|A|2757
3JAG|1|5|G|2758
3JAG|1|5|G|2759
3JAG|1|5|G|2760
3JAG|1|5|U|2761
3JAG|1|5|G|2762
3JAG|1|5|U|2763
3JAG|1|5|A|2764
3JAG|1|5|A|2765
3JAG|1|5|A|2766
3JAG|1|5|U|2767
3JAG|1|5|C|2768
3JAG|1|5|U|2769
3JAG|1|5|C|2770

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

eL27

Chain g

eL34