3D structure

PDB id
3JAG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
CUGGC*GGACAAG*CCCGAGAUUG
Length
22 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAG|1|9|C|1391
3JAG|1|9|U|1392
3JAG|1|9|G|1393
3JAG|1|9|G|1394
3JAG|1|9|C|1395
*
3JAG|1|9|G|1450
3JAG|1|9|G|1451
3JAG|1|9|A|1452
3JAG|1|9|C|1453
3JAG|1|9|A|1454
3JAG|1|9|A|1455
3JAG|1|9|G|1456
*
3JAG|1|9|C|1470
3JAG|1|9|C|1471
3JAG|1|9|C|1472
3JAG|1|9|G|1473
3JAG|1|9|A|1474
3JAG|1|9|G|1475
3JAG|1|9|A|1476
3JAG|1|9|U|1477
3JAG|1|9|U|1478
3JAG|1|9|G|1479

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain RR
eS17
Chain UU
uS10
Chain cc
eS28
Chain dd
uS14
Chain gg
RACK1

Coloring options:

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