J3_3JAH_031

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

3JAH|1|5|C|216, 3JAH|1|5|C|217, 3JAH|1|5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAH|1|5|C|196
3JAH|1|5|A|197
3JAH|1|5|A|198
3JAH|1|5|G|199
*
3JAH|1|5|C|215
3JAH|1|5|C|216
3JAH|1|5|C|217
3JAH|1|5|A|218
3JAH|1|5|G|219
3JAH|1|5|C|220
3JAH|1|5|C|221
3JAH|1|5|C|222
3JAH|1|5|G|223
3JAH|1|5|U|224
3JAH|1|5|G|225
3JAH|1|5|G|226
3JAH|1|5|A|227
3JAH|1|5|C|228
*
3JAH|1|5|G|240
3JAH|1|5|G|241
3JAH|1|5|U|242
3JAH|1|5|A|243
3JAH|1|5|G|244

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain Y

uL24