J3_3JAH_035

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GCAGGAC*GCUAAGG*CACCUGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAH|1|5|G|1965
3JAH|1|5|C|1966
3JAH|1|5|A|1967
3JAH|1|5|G|1968
3JAH|1|5|G|1969
3JAH|1|5|A|1970
3JAH|1|5|C|1971
*
3JAH|1|5|G|1995
3JAH|1|5|C|1996
3JAH|1|5|U|1997
3JAH|1|5|A|1998
3JAH|1|5|A|1999
3JAH|1|5|G|2000
3JAH|1|5|G|2001
*
3JAH|1|5|C|2016
3JAH|1|5|A|2017
3JAH|1|5|C|2018
3JAH|1|5|C|2019
3JAH|1|5|U|2020
3JAH|1|5|G|2021
3JAH|1|5|C|2022

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain m

eL40

Chain s

uL10

Chain t

uL11