J3_3JAI_001

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

3JAI|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|C|112
3JAI|1|5|A|113
3JAI|1|5|G|114
3JAI|1|5|C|115
3JAI|1|5|G|116
*
3JAI|1|5|C|155
3JAI|1|5|G|156
3JAI|1|5|U|157
3JAI|1|5|A|158
3JAI|1|5|C|159
3JAI|1|5|G|160
*
3JAI|1|5|C|275
3JAI|1|5|C|276
3JAI|1|5|G|277
3JAI|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

eL15

Chain h

uL29

Chain i

eL36