J3_3JAI_003

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GCGCAGUC*GUGC*GACGUC

Length

18 nucleotides

Bulged bases

3JAI|1|5|G|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|G|448
3JAI|1|5|C|449
3JAI|1|5|G|450
3JAI|1|5|C|451
3JAI|1|5|A|452
3JAI|1|5|G|453
3JAI|1|5|U|454
3JAI|1|5|C|455
*
3JAI|1|5|G|701
3JAI|1|5|U|702
3JAI|1|5|G|703
3JAI|1|5|C|704
*
3JAI|1|5|G|1293
3JAI|1|5|A|1294
3JAI|1|5|C|1295
3JAI|1|5|G|1296
3JAI|1|5|U|1297
3JAI|1|5|C|1298

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

eL6

Chain e

eL32

Chain f

eL33