3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
GGAGAUG*CAGU*AGGGUGUAAAUCUC
Length
25 nucleotides
Bulged bases
3JAI|1|5|C|2768
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|5|G|2549
3JAI|1|5|G|2550
3JAI|1|5|A|2551
3JAI|1|5|G|2552
3JAI|1|5|A|2553
3JAI|1|5|U|2554
3JAI|1|5|G|2555
*
3JAI|1|5|C|2572
3JAI|1|5|A|2573
3JAI|1|5|G|2574
3JAI|1|5|U|2575
*
3JAI|1|5|A|2757
3JAI|1|5|G|2758
3JAI|1|5|G|2759
3JAI|1|5|G|2760
3JAI|1|5|U|2761
3JAI|1|5|G|2762
3JAI|1|5|U|2763
3JAI|1|5|A|2764
3JAI|1|5|A|2765
3JAI|1|5|A|2766
3JAI|1|5|U|2767
3JAI|1|5|C|2768
3JAI|1|5|U|2769
3JAI|1|5|C|2770

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain Z
eL27
Chain g
eL34

Coloring options:

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