3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
CUGGC*GGAC*GAUUG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|9|C|1391
3JAI|1|9|U|1392
3JAI|1|9|G|1393
3JAI|1|9|G|1394
3JAI|1|9|C|1395
*
3JAI|1|9|G|1450
3JAI|1|9|G|1451
3JAI|1|9|A|1452
3JAI|1|9|C|1453
*
3JAI|1|9|G|1475
3JAI|1|9|A|1476
3JAI|1|9|U|1477
3JAI|1|9|U|1478
3JAI|1|9|G|1479

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain RR
eS17
Chain UU
uS10
Chain dd
uS14
Chain gg
RACK1

Coloring options:

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