3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
GCAGGAC*GCUAAGG*CACCUGC
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|5|G|1965
3JAI|1|5|C|1966
3JAI|1|5|A|1967
3JAI|1|5|G|1968
3JAI|1|5|G|1969
3JAI|1|5|A|1970
3JAI|1|5|C|1971
*
3JAI|1|5|G|1995
3JAI|1|5|C|1996
3JAI|1|5|U|1997
3JAI|1|5|A|1998
3JAI|1|5|A|1999
3JAI|1|5|G|2000
3JAI|1|5|G|2001
*
3JAI|1|5|C|2016
3JAI|1|5|A|2017
3JAI|1|5|C|2018
3JAI|1|5|C|2019
3JAI|1|5|U|2020
3JAI|1|5|G|2021
3JAI|1|5|C|2022

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain m
eL40
Chain s
uL10
Chain t
uL11

Coloring options:

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