J3_3JAI_036

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GCAGGAC*GCUAAGG*CACCUGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|G|1965
3JAI|1|5|C|1966
3JAI|1|5|A|1967
3JAI|1|5|G|1968
3JAI|1|5|G|1969
3JAI|1|5|A|1970
3JAI|1|5|C|1971
*
3JAI|1|5|G|1995
3JAI|1|5|C|1996
3JAI|1|5|U|1997
3JAI|1|5|A|1998
3JAI|1|5|A|1999
3JAI|1|5|G|2000
3JAI|1|5|G|2001
*
3JAI|1|5|C|2016
3JAI|1|5|A|2017
3JAI|1|5|C|2018
3JAI|1|5|C|2019
3JAI|1|5|U|2020
3JAI|1|5|G|2021
3JAI|1|5|C|2022

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain m

eL40

Chain s

uL10

Chain t

uL11