3D structure

PDB id
3JAI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
UGGA*UUAAGAG*CAUUA
Length
16 nucleotides
Bulged bases
3JAI|1|9|G|921
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JAI|1|9|U|682
3JAI|1|9|G|683
3JAI|1|9|G|684
3JAI|1|9|A|685
*
3JAI|1|9|U|917
3JAI|1|9|U|918
3JAI|1|9|A|919
3JAI|1|9|A|920
3JAI|1|9|G|921
3JAI|1|9|A|922
3JAI|1|9|G|923
*
3JAI|1|9|C|1019
3JAI|1|9|A|1020
3JAI|1|9|U|1021
3JAI|1|9|U|1022
3JAI|1|9|A|1023

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain HH
eS7
Chain LL
uS17
Chain NN
uS15
Chain WW
uS8
Chain XX
uS12
Chain bb
eS27

Coloring options:

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