J3_3JAJ_008

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CGAAGUGGA*UCCAA*UCUG

Length

18 nucleotides

Bulged bases

3JAJ|1|5|A|2396

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|C|2393
3JAJ|1|5|G|2394
3JAJ|1|5|A|2395
3JAJ|1|5|A|2396
3JAJ|1|5|G|2397
3JAJ|1|5|U|2398
3JAJ|1|5|G|2399
3JAJ|1|5|G|2400
3JAJ|1|5|A|2401
*
3JAJ|1|5|U|2803
3JAJ|1|5|C|2804
3JAJ|1|5|C|2805
3JAJ|1|5|A|2806
3JAJ|1|5|A|2807
*
3JAJ|1|5|U|2819
3JAJ|1|5|C|2820
3JAJ|1|5|U|2821
3JAJ|1|5|G|2822

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain g

Ribosomal protein eL34

Chain j

Ribosomal protein eL37