J3_3JAJ_012
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGGGG*UCGCUUCUGGCGCCAAG*CGAC
- Length
- 26 nucleotides
- Bulged bases
- 3JAJ|1|5|U|4117, 3JAJ|1|5|U|4118, 3JAJ|1|5|C|4119, 3JAJ|1|5|U|4120, 3JAJ|1|5|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|G|4091
3JAJ|1|5|G|4092
3JAJ|1|5|G|4093
3JAJ|1|5|G|4094
3JAJ|1|5|G|4095
*
3JAJ|1|5|U|4113
3JAJ|1|5|C|4114
3JAJ|1|5|G|4115
3JAJ|1|5|C|4116
3JAJ|1|5|U|4117
3JAJ|1|5|U|4118
3JAJ|1|5|C|4119
3JAJ|1|5|U|4120
3JAJ|1|5|G|4121
3JAJ|1|5|G|4122
3JAJ|1|5|C|4123
3JAJ|1|5|G|4124
3JAJ|1|5|C|4125
3JAJ|1|5|C|4126
3JAJ|1|5|A|4127
3JAJ|1|5|A|4128
3JAJ|1|5|G|4129
*
3JAJ|1|5|C|4155
3JAJ|1|5|G|4156
3JAJ|1|5|A|4157
3JAJ|1|5|C|4158
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL2
- Chain G
- Ribosomal protein eL8
- Chain X
- Ribosomal protein uL23
- Chain Z
- Ribosomal protein eL27
- Chain c
- Ribosomal protein eL30
- Chain g
- Ribosomal protein eL34
- Chain p
- Ribosomal protein eL43
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