J3_3JAJ_026
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CAGCGCCGAAU*ACAUGUGGCGUACG*CGG
- Length
- 28 nucleotides
- Bulged bases
- 3JAJ|1|5|G|119, 3JAJ|1|5|U|150, 3JAJ|1|5|C|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|C|112
3JAJ|1|5|A|113
3JAJ|1|5|G|114
3JAJ|1|5|C|115
3JAJ|1|5|G|116
3JAJ|1|5|C|117
3JAJ|1|5|C|118
3JAJ|1|5|G|119
3JAJ|1|5|A|120
3JAJ|1|5|A|121
3JAJ|1|5|U|122
*
3JAJ|1|5|A|147
3JAJ|1|5|C|148
3JAJ|1|5|A|149
3JAJ|1|5|U|150
3JAJ|1|5|G|151
3JAJ|1|5|U|152
3JAJ|1|5|G|153
3JAJ|1|5|G|154
3JAJ|1|5|C|155
3JAJ|1|5|G|156
3JAJ|1|5|U|157
3JAJ|1|5|A|158
3JAJ|1|5|C|159
3JAJ|1|5|G|160
*
3JAJ|1|5|C|276
3JAJ|1|5|G|277
3JAJ|1|5|G|278
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- Ribosomal protein eL8
- Chain L
- Ribosomal protein eL13
- Chain N
- Ribosomal protein eL15
- Chain h
- Ribosomal protein uL29
- Chain i
- Ribosomal protein eL36
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