J3_3JAJ_031
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UGAACUA*UAGGG*UAAUCGAA
- Length
- 20 nucleotides
- Bulged bases
- 3JAJ|1|5|A|1534, 3JAJ|1|5|G|1625, 3JAJ|1|5|A|1638, 3JAJ|1|5|G|1641, 3JAJ|1|5|A|1642
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|U|1531
3JAJ|1|5|G|1532
3JAJ|1|5|A|1533
3JAJ|1|5|A|1534
3JAJ|1|5|C|1535
3JAJ|1|5|U|1536
3JAJ|1|5|A|1537
*
3JAJ|1|5|U|1622
3JAJ|1|5|A|1623
3JAJ|1|5|G|1624
3JAJ|1|5|G|1625
3JAJ|1|5|G|1626
*
3JAJ|1|5|U|1636
3JAJ|1|5|A|1637
3JAJ|1|5|A|1638
3JAJ|1|5|U|1639
3JAJ|1|5|C|1640
3JAJ|1|5|G|1641
3JAJ|1|5|A|1642
3JAJ|1|5|A|1643
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 2
- Nascent chain
- Chain A
- Ribosomal protein uL2
- Chain N
- Ribosomal protein eL15
- Chain P
- Ribosomal protein uL22
- Chain j
- Ribosomal protein eL37
- Chain l
- Ribosomal protein eL39
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