J3_3JAJ_039
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UAUCAUUG*CCAAGCGUU*ACUAAUA
- Length
- 24 nucleotides
- Bulged bases
- 3JAJ|1|5|A|4464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|U|4463
3JAJ|1|5|A|4464
3JAJ|1|5|U|4465
3JAJ|1|5|C|4466
3JAJ|1|5|A|4467
3JAJ|1|5|U|4468
3JAJ|1|5|U|4469
3JAJ|1|5|G|4470
*
3JAJ|1|5|C|4485
3JAJ|1|5|C|4486
3JAJ|1|5|A|4487
3JAJ|1|5|A|4488
3JAJ|1|5|G|4489
3JAJ|1|5|C|4490
3JAJ|1|5|G|4491
3JAJ|1|5|U|4492
3JAJ|1|5|U|4493
*
3JAJ|1|5|A|4507
3JAJ|1|5|C|4508
3JAJ|1|5|U|4509
3JAJ|1|5|A|4510
3JAJ|1|5|A|4511
3JAJ|1|5|U|4512
3JAJ|1|5|A|4513
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain H
- Ribosomal protein uL6
- Chain O
- Ribosomal protein uL13
- Chain V
- Ribosomal protein uL14
- Chain m
- Ribosomal protein eL40
Coloring options: