J3_3JAJ_045
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CUGGCAUGC*GAGGGACAAG*CCCGAGAUUG
- Length
- 29 nucleotides
- Bulged bases
- 3JAJ|1|S2|U|1397, 3JAJ|1|S2|A|1454
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|S2|C|1391
3JAJ|1|S2|U|1392
3JAJ|1|S2|G|1393
3JAJ|1|S2|G|1394
3JAJ|1|S2|C|1395
3JAJ|1|S2|A|1396
3JAJ|1|S2|U|1397
3JAJ|1|S2|G|1398
3JAJ|1|S2|C|1399
*
3JAJ|1|S2|G|1447
3JAJ|1|S2|A|1448
3JAJ|1|S2|G|1449
3JAJ|1|S2|G|1450
3JAJ|1|S2|G|1451
3JAJ|1|S2|A|1452
3JAJ|1|S2|C|1453
3JAJ|1|S2|A|1454
3JAJ|1|S2|A|1455
3JAJ|1|S2|G|1456
*
3JAJ|1|S2|C|1470
3JAJ|1|S2|C|1471
3JAJ|1|S2|C|1472
3JAJ|1|S2|G|1473
3JAJ|1|S2|A|1474
3JAJ|1|S2|G|1475
3JAJ|1|S2|A|1476
3JAJ|1|S2|U|1477
3JAJ|1|S2|U|1478
3JAJ|1|S2|G|1479
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- Ribosomal protein uS3
- Chain SF
- Ribosomal protein uS7
- Chain SQ
- Ribosomal protein uS9
- Chain SR
- Ribosomal protein eS17
- Chain SU
- Ribosomal protein uS10
- Chain Sd
- Ribosomal protein uS14
- Chain Sg
- Ribosomal protein RACK1
Coloring options: