J3_3JAJ_046
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CACUGACUG*CAUUCGUGAUGGGGAUCG*CAUGAACGAG
- Length
- 37 nucleotides
- Bulged bases
- 3JAJ|1|S2|U|1535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|S2|C|1532
3JAJ|1|S2|A|1533
3JAJ|1|S2|C|1534
3JAJ|1|S2|U|1535
3JAJ|1|S2|G|1536
3JAJ|1|S2|A|1537
3JAJ|1|S2|C|1538
3JAJ|1|S2|U|1539
3JAJ|1|S2|G|1540
*
3JAJ|1|S2|C|1593
3JAJ|1|S2|A|1594
3JAJ|1|S2|U|1595
3JAJ|1|S2|U|1596
3JAJ|1|S2|C|1597
3JAJ|1|S2|G|1598
3JAJ|1|S2|U|1599
3JAJ|1|S2|G|1600
3JAJ|1|S2|A|1601
3JAJ|1|S2|U|1602
3JAJ|1|S2|G|1603
3JAJ|1|S2|G|1604
3JAJ|1|S2|G|1605
3JAJ|1|S2|G|1606
3JAJ|1|S2|A|1607
3JAJ|1|S2|U|1608
3JAJ|1|S2|C|1609
3JAJ|1|S2|G|1610
*
3JAJ|1|S2|C|1629
3JAJ|1|S2|A|1630
3JAJ|1|S2|U|1631
3JAJ|1|S2|G|1632
3JAJ|1|S2|A|1633
3JAJ|1|S2|A|1634
3JAJ|1|S2|C|1635
3JAJ|1|S2|G|1636
3JAJ|1|S2|A|1637
3JAJ|1|S2|G|1638
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SF
- Ribosomal protein uS7
- Chain SQ
- Ribosomal protein uS9
- Chain SS
- Ribosomal protein uS13
- Chain ST
- Ribosomal protein eS19
- Chain SZ
- Ribosomal protein es25
Coloring options: