J3_3JAJ_048
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GAGAUGGG*CCGUUCCGAAGGG*CGGCCGAUC
- Length
- 30 nucleotides
- Bulged bases
- 3JAJ|1|5|C|2470, 3JAJ|1|5|A|2472, 3JAJ|1|5|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|G|2450
3JAJ|1|5|A|2451
3JAJ|1|5|G|2452
3JAJ|1|5|A|2453
3JAJ|1|5|U|2454
3JAJ|1|5|G|2455
3JAJ|1|5|G|2456
3JAJ|1|5|G|2457
*
3JAJ|1|5|C|2464
3JAJ|1|5|C|2465
3JAJ|1|5|G|2466
3JAJ|1|5|U|2467
3JAJ|1|5|U|2468
3JAJ|1|5|C|2469
3JAJ|1|5|C|2470
3JAJ|1|5|G|2471
3JAJ|1|5|A|2472
3JAJ|1|5|A|2473
3JAJ|1|5|G|2474
3JAJ|1|5|G|2475
3JAJ|1|5|G|2476
*
3JAJ|1|5|C|2501
3JAJ|1|5|G|2502
3JAJ|1|5|G|2503
3JAJ|1|5|C|2504
3JAJ|1|5|C|2505
3JAJ|1|5|G|2506
3JAJ|1|5|A|2507
3JAJ|1|5|U|2508
3JAJ|1|5|C|2509
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- Ribosomal protein uL2
- Chain G
- Ribosomal protein eL8
- Chain N
- Ribosomal protein eL15
- Chain X
- Ribosomal protein uL23
- Chain j
- Ribosomal protein eL37
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