J3_3JCD_032

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGACGG*UCC*GAAAAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|A|G|1424
3JCD|1|A|G|1425
3JCD|1|A|G|1426
3JCD|1|A|A|1427
3JCD|1|A|C|1428
3JCD|1|A|G|1429
3JCD|1|A|G|1430
*
3JCD|1|A|U|1563
3JCD|1|A|C|1564
3JCD|1|A|C|1565
*
3JCD|1|A|G|1568
3JCD|1|A|A|1569
3JCD|1|A|A|1570
3JCD|1|A|A|1571
3JCD|1|A|A|1572
3JCD|1|A|G|1573
3JCD|1|A|C|1574

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2