J3_3JCD_053
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 3JCD|1|a|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCD|1|a|U|672
3JCD|1|a|A|673
3JCD|1|a|G|674
3JCD|1|a|A|675
3JCD|1|a|A|676
3JCD|1|a|U|677
*
3JCD|1|a|G|713
3JCD|1|a|G|714
3JCD|1|a|A|715
3JCD|1|a|A|716
3JCD|1|a|U|717
3JCD|1|a|A|718
3JCD|1|a|C|719
3JCD|1|a|C|720
3JCD|1|a|G|721
3JCD|1|a|G|722
3JCD|1|a|U|723
3JCD|1|a|G|724
3JCD|1|a|G|725
*
3JCD|1|a|C|732
3JCD|1|a|G|733
3JCD|1|a|G|734
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain f
- 30S ribosomal protein S6
- Chain k
- 30S ribosomal protein S11
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
- Chain u
- 30S ribosomal protein S21
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