J3_3JD5_001
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- CUCUU*AAUUAG*CAAG
- Length
- 15 nucleotides
- Bulged bases
- 3JD5|1|A|U|218
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|C|30
3JD5|1|A|U|31
3JD5|1|A|C|32
3JD5|1|A|U|33
3JD5|1|A|U|34
*
3JD5|1|A|A|216
3JD5|1|A|A|217
3JD5|1|A|U|218
3JD5|1|A|U|219
3JD5|1|A|A|220
3JD5|1|A|G|221
*
3JD5|1|A|C|266
3JD5|1|A|A|267
3JD5|1|A|A|268
3JD5|1|A|G|269
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain L
- 28S ribosomal protein S12, mitochondrial
- Chain c
- 28S ribosomal protein S25, mitochondrial
- Chain p
- 28S ribosomal protein S18b, mitochondrial
Coloring options: