J3_3OTO_017
3D structure
- PDB id
- 3OTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUACCAG*CUGGGCGA
- Length
- 31 nucleotides
- Bulged bases
- 3OTO|1|A|A|975, 3OTO|1|A|G|976, 3OTO|1|A|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3OTO|1|A|U|955
3OTO|1|A|U|956
3OTO|1|A|U|957
3OTO|1|A|A|958
3OTO|1|A|A|959
3OTO|1|A|U|960
3OTO|1|A|U|961
3OTO|1|A|C|962
*
3OTO|1|A|G|973
3OTO|1|A|A|974
3OTO|1|A|A|975
3OTO|1|A|G|976
3OTO|1|A|A|977
3OTO|1|A|A|978
3OTO|1|A|C|979
3OTO|1|A|C|980
3OTO|1|A|U|981
3OTO|1|A|U|982
3OTO|1|A|A|983
3OTO|1|A|C|984
3OTO|1|A|C|985
3OTO|1|A|A|986
3OTO|1|A|G|987
*
3OTO|1|A|C|1218
3OTO|1|A|U|1219
3OTO|1|A|G|1220
3OTO|1|A|G|1221
3OTO|1|A|G|1222
3OTO|1|A|C|1223
3OTO|1|A|G|1224
3OTO|1|A|A|1225
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain M
- 30S RIBOSOMAL PROTEIN S13
- Chain N
- 30S RIBOSOMAL PROTEIN S14
- Chain S
- 30S RIBOSOMAL PROTEIN S19
Coloring options: