J3_3OTO_020
3D structure
- PDB id
- 3OTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- CUUGACAUGC*GCACAGGUG*CCCUUACG
- Length
- 27 nucleotides
- Bulged bases
- 3OTO|1|A|A|994, 3OTO|1|A|U|1049, 3OTO|1|A|U|1212
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3OTO|1|A|C|990
3OTO|1|A|U|991
3OTO|1|A|U|992
3OTO|1|A|G|993
3OTO|1|A|A|994
3OTO|1|A|C|995
3OTO|1|A|A|996
3OTO|1|A|U|997
3OTO|1|A|G|998
3OTO|1|A|C|999
*
3OTO|1|A|G|1042
3OTO|1|A|C|1043
3OTO|1|A|A|1044
3OTO|1|A|C|1045
3OTO|1|A|A|1046
3OTO|1|A|G|1047
3OTO|1|A|G|1048
3OTO|1|A|U|1049
3OTO|1|A|G|1050
*
3OTO|1|A|C|1208
3OTO|1|A|C|1209
3OTO|1|A|C|1210
3OTO|1|A|U|1211
3OTO|1|A|U|1212
3OTO|1|A|A|1213
3OTO|1|A|C|1214
3OTO|1|A|G|1215
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- 30S RIBOSOMAL PROTEIN S14
Coloring options: