J3_3OTO_021

3D structure

PDB id

3OTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)

Experimental method

X-RAY DIFFRACTION

Resolution

3.69 Å

Loop

Sequence

UAGGGAAC*GGUGC*GCCCUA

Length

19 nucleotides

Bulged bases

3OTO|1|A|A|1004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3OTO|1|A|U|1000
3OTO|1|A|A|1001
3OTO|1|A|G|1002
3OTO|1|A|G|1003
3OTO|1|A|G|1003|||A
3OTO|1|A|A|1004
3OTO|1|A|A|1005
3OTO|1|A|C|1006
*
3OTO|1|A|G|1023
3OTO|1|A|G|1024
3OTO|1|A|U|1025
3OTO|1|A|G|1026
3OTO|1|A|C|1027
*
3OTO|1|A|G|1036
3OTO|1|A|C|1037
3OTO|1|A|C|1038
3OTO|1|A|C|1039
3OTO|1|A|U|1040
3OTO|1|A|A|1041

Current chains

Chain A

16S rRNA

Nearby chains