J3_3OW2_003

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAA*UGUUAG*CGUG

Length

13 nucleotides

Bulged bases

3OW2|1|0|U|825

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_003 not in the Motif Atlas

Homologous match to J3_4V9F_003

Geometric discrepancy: 0.0424

The information below is about J3_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_69816.1

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

9

Unit IDs

3OW2|1|0|C|789
3OW2|1|0|A|790
3OW2|1|0|A|791
*
3OW2|1|0|U|823
3OW2|1|0|G|824
3OW2|1|0|U|825
3OW2|1|0|U|826
3OW2|1|0|A|827
3OW2|1|0|G|828
*
3OW2|1|0|C|853
3OW2|1|0|G|854
3OW2|1|0|U|855
3OW2|1|0|G|856

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain O

50S ribosomal protein L19e

Chain Y

50S ribosomal protein L37Ae