J3_3OW2_005

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CUAAUG*CAUG*CAAG

Length

14 nucleotides

Bulged bases

3OW2|1|0|U|1702

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_005 not in the Motif Atlas

Homologous match to J3_4V9F_005

Geometric discrepancy: 0.0614

The information below is about J3_4V9F_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

3OW2|1|0|C|1404
3OW2|1|0|U|1405
3OW2|1|0|A|1406
3OW2|1|0|A|1407
3OW2|1|0|U|1408
3OW2|1|0|G|1409
*
3OW2|1|0|C|1700
3OW2|1|0|A|1701
3OW2|1|0|U|1702
3OW2|1|0|G|1703
*
3OW2|1|0|C|1715
3OW2|1|0|A|1716
3OW2|1|0|A|1717
3OW2|1|0|G|1718

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain O

50S ribosomal protein L19e