3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CUC*GAG*CAAAAG
Length
12 nucleotides
Bulged bases
3OW2|1|0|A|2368
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_3OW2_008 not in the Motif Atlas
Homologous match to J3_4V9F_008
Geometric discrepancy: 0.0443
The information below is about J3_4V9F_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_61124.2
Basepair signature
cWW-tWH-tWW-cWW-F-cWW
Number of instances in this motif group
7

Unit IDs

3OW2|1|0|C|2329
3OW2|1|0|U|2330
3OW2|1|0|C|2331
*
3OW2|1|0|G|2355
3OW2|1|0|A|2356
3OW2|1|0|G|2357
*
3OW2|1|0|C|2366
3OW2|1|0|A|2367
3OW2|1|0|A|2368
3OW2|1|0|A|2369
3OW2|1|0|A|2370
3OW2|1|0|G|2371

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 9
5S ribosomal RNA; 5S rRNA
Chain D
50S ribosomal protein L5P
Chain M
50S ribosomal protein L18P
Chain P
50S ribosomal protein L21e

Coloring options:


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