J3_3PIP_011
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CUC*GAGC*GUAGAAG
- Length
- 14 nucleotides
- Bulged bases
- 3PIP|1|X|G|2313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3PIP|1|X|C|2274
3PIP|1|X|U|2275
3PIP|1|X|C|2276
*
3PIP|1|X|G|2300
3PIP|1|X|A|2301
3PIP|1|X|G|2302
3PIP|1|X|C|2303
*
3PIP|1|X|G|2310
3PIP|1|X|U|2311
3PIP|1|X|A|2312
3PIP|1|X|G|2313
3PIP|1|X|A|2314
3PIP|1|X|A|2315
3PIP|1|X|G|2316
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain D
- 50S ribosomal protein L5
- Chain L
- 50S ribosomal protein L18
- Chain T
- 50S ribosomal protein L27
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: