J3_3PIP_019
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CGAGC*GCGGAG*CGAGUCCGAAUAGGGCGGCAUUAG
- Length
- 35 nucleotides
- Bulged bases
- 3PIP|1|X|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3PIP|1|X|C|611
3PIP|1|X|G|612
3PIP|1|X|A|613
3PIP|1|X|G|614
3PIP|1|X|C|615
*
3PIP|1|X|G|634
3PIP|1|X|C|635
3PIP|1|X|G|636
3PIP|1|X|G|637
3PIP|1|X|A|638
3PIP|1|X|G|639
*
3PIP|1|X|C|646
3PIP|1|X|G|647
3PIP|1|X|A|648
3PIP|1|X|G|649
3PIP|1|X|U|650
3PIP|1|X|C|651
3PIP|1|X|C|652
3PIP|1|X|G|653
3PIP|1|X|A|654
3PIP|1|X|A|655
3PIP|1|X|U|656
3PIP|1|X|A|657
3PIP|1|X|G|658
3PIP|1|X|G|659
3PIP|1|X|G|660
3PIP|1|X|C|661
3PIP|1|X|G|662
3PIP|1|X|G|663
3PIP|1|X|C|664
3PIP|1|X|A|665
3PIP|1|X|U|666
3PIP|1|X|U|667
3PIP|1|X|A|668
3PIP|1|X|G|669
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L4
- Chain I
- 50S ribosomal protein L15
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